Why do plants lose their leaves and how do they do it? Abscission pathway explained.

Deciduous trees in the northern hemisphere shed their broad leaves to avoid the weight of ice and snow, which could damage branches. Evergreens have narrow needle shaped leaves that are more durable to winter conditions than the broad leaves on deciduous trees and can take being frozen. The abscission process is coupled with the senescence process to recapture vital nutrients in the leaves prior to shedding. Recapturing nitrogen contained in the pigment chlorophyll results in the color change that is observed in fall.

Across the globe, plants also shed their leaves in response to drought. Shedding leaves during drought allows trees to limit their total water load, allowing their survival. Typically, plants will reclaim nitrogen from leaves shed as protection against drought similarly as to when they are shed before winter. Localized infections on a plant can also be shed to limit the spread of the disease as a defense mechanism.

Plants can abscise their leaves because they have specialized tissue regions at their base of the leaving organ that can separate once an intricate and sophisticated signaling pathway is activated. These regions, called abscission zones, are visible by eye on careful examination and have densely packed cells. A cross section shows how abscission zone cells are small than surrounding cells. However, after abscission is activated, the cells expand. After the separation plane is formed the abscission zone cells collapse forming a protective layer. Here, this abscission zone in an Arabidopsis leaf has been activated by drought and its cells go through an expansion and collapse as the separation plane is formed.

At the molecular level, the abscission signaling pathway has two molecular signal amplifiers that allow the abscission signaling switch to be fully turned on rapidly. First there is a MAPK kinase cascade to amplify the signal and second the entire pathway is organized in a positive feedback loop. The pathway also features an extracellular peptide signal perceived by receptor-like kinase since a spatial gradient is as part of the regulatory mechanism. Finally, the abscission signaling circuity is terminated by a circuit breaker-like mechanism similar to the electrical circuit breaker invented by Thomas Edison in 1879. The initiating peptide signal is secreted from the leaving side of the abscission zone so that once the leaf separates the initiating signal is also separated from the plant. This ensures that the violent cellular processes associated with abscission are well localized to the intended area and do not cause harm to other parts of the plant.

I hope the next time you see leaves, fruits, or other parts of the plant falling, perhaps you will remember nature’s ingenuity building that system.

Seven things CRISPR can actually help accomplish in agriculture

CRISPR gene editing can do a number of things to assist breeding. There is a lot of hype around gene editing but in reality it can do only very measured things. Here, I describe the actual things CRISPR can do in agriculture.

Realistic things CRISPR gene editing can accomplish in agriculture.

Symbiotic Nitrogen Fixation

Soybean symbiosis with Rhizobia

Legumes (beans) are capable of symbiotic nitrogen fixation. The bacteria turn atmospheric nitrogen into ammonia that the plant can use. Soybean Rhizobia inoculum can really make soybeans grow much bigger and healthier without adding fertilizer. The time-lapse video below shows how beneficial Rhizobia can be to soybean growth. All pots had identical soil. The only difference is the seeds that went into the pots on the right had Cel-Tech soybean inoculum on them. The Rhizobia form a symbiotic relationship with the soybean plants leading to nodule formation on the roots. These root nodules provide the plants with an abundant source of nitrogen.

Soybean growth details

  1. Soil (Promix BX) was autoclaved to kill residual bacteria.
  2. Seeds were planted into wet soil. Plants with Rhizobia were made by touching the seeds to Cel-Tech Inoculant prior to planting.
  3. Plants were grown in 16 hours of light per day at 23 degrees Celsius. Plants were watered as needed.
  4. Note: Extreme care is needed to prevent non-inoculated plants from “catching” the Rhizobia from the inoculated plants (ie. do not cross contaminate by splashing water or soil between the treatments). Soybeans are very susceptible to Rhizobia colonization.

Here are several other plant time-lapse videos.